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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809223.1_cds_XP_016495657.1_9952
CDS Infomation

[gene=LOC107814720] [db_xref=GeneID:107814720] [protein=phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like] [protein_id=XP_016495657.1] [location=join(11619..11765,11993..12115,12376..12468,13773..13829,13998..14053,14184..14276,14920..15010,15129..15166,15302..15340,15989..16065,16139..16223,16322..16418,16509..16605,18125..18196,18381..18447,18524..18649,19547..19601,19684..19734)] [gbkey=CDS]
Sequence

ATGGCTGAAGACGCCATTCTAGCTTTTCTTGAGAAGAATGATGAGATTTCTGATAGTGGA
AAATTCGCCGATGAACATTGTTTCGCCCACGATGAGATCGTCAATGTCATTCGCAGCCTT
AATGGATTTAGGCTTGTTGATGCTCAGGATATTAGGAGAGAGAGATGGGTGCTTACTGAA
GAGGGGAAAACCTATGCTGCCGTAGGTTCTCCGGAATTCCAGCTTTTCTCAGTAGTGCCA
CCGGAGGGAATTGCACGCGAGGACTTGCAGAAAAAGTTTGTTCCTGCAGTTTATAAAATT
GGTTGTCAGCAAGCTATAAAGAATAAGTGGGTGGAGATGGCGAAGACCCACGTTTCAAGG
AAGGTCCAACATGCTGATGACAAAGTTAAAAATTTGCTCTTGCGGATACAAAATGGCGAG
GCTGTCAATCAGGAGGATATCGATGCTCTAAAGCGAAGAAAACTAATAACTCAGCAGGTT
TGGAAAGGAAACTCAGTAAGAAAAGGTCCTAATTATGCTCCTAAAAGGAAAAGAGCAGCT
ACTGATCTCACTCGGGAAAACTTACAGAGGGGTGACTGGAAGGAATTGGAATTTAAAGAG
TACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCTATCTTCATCCATTGCTCAAG
GTTAGGCGGCAGATACAAATGGTTTTTCTTAATATGGGGTTTGAGGAGATGCCAACAAAT
AATTATGTTGAAAGCAGTTTTTGGAACTTTGATGCACTTTTCCAGCCACAACAGCACCCT
GCCCGTGATTCCCATGATACATTCTTTTTGAAAGTACCTTCCACTACAAAGATGCTTCCA
GAAGATTATGTTGAGCGCGTAAAACAAGTTCATGAATCTGGTGGTTACCAATCTAGGGGA
TATGGGTGTGATTGGAAAAGAGAGGAAGCAAACAAGAATCTTTTGCGGACACATACTACT
GCTGTTTCGTCAAGAATGTTGTGTGCATTAGCTCAGGAGCCGTTCACCCCCAAGAAATAC
TATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATAAGACACATCTTGCTGAATTT
CACCAGATAGAAGGCTTAATATGTGATCGTGGACTTACTCTTGGTGACCTGATTGGTGTT
CTTCATGACTTCTTTTCTCGTCTAGGAATGTCCAAGCTTCGGTTCAAACCTGCTTATAAT
CCTTATACTGAGCCCAGCATGGAAATTTTCAGCTACCATGAAGGTTTACAGAAGTGGATA
GAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTGCTTCCCATGGGGCTTCCAGAA
GATGTTCGGGTTATTGCCTGGGGTCTTTCGCTTGAGAGGCCTACCATGATTCTCTATGGA
TATGACAACATCAGAGATCTTTTTGGTCCCAAGGTGGATCTAGCTGAACTCAAAAAGAAT
CCAATATGCCGGCTTGGACTTTAG

Peptide Sequence

PEP ID

XP_016495657.1
PEP Infomation

PREDICTED: phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAEDAILAFLEKNDEISDSGKFADEHCFAHDEIVNVIRSLNGFRLVDAQDIRRERWVLTE
EGKTYAAVGSPEFQLFSVVPPEGIAREDLQKKFVPAVYKIGCQQAIKNKWVEMAKTHVSR
KVQHADDKVKNLLLRIQNGEAVNQEDIDALKRRKLITQQVWKGNSVRKGPNYAPKRKRAA
TDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGYLHPLLKVRRQIQMVFLNMGFEEMPTN
NYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTKMLPEDYVERVKQVHESGGYQSRG
YGCDWKREEANKNLLRTHTTAVSSRMLCALAQEPFTPKKYYSIDRVFRNEAVDKTHLAEF
HQIEGLICDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLQKWI
EVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGYDNIRDLFGPKVDLAELKKN
PICRLGL

Transcript Sequence

Gene sequence data has not been registered.